Table 1. Strains used in this study | ||||
Collection | Species/Variety | Collection Locale | Host | Code |
Number | ||||
90-211.1 | P. k. var. ? | Clarence House, Antigua | Cephalocereanus royenii | PK?ClarCrC |
91-120.2 | P. k. var. ? | Canaveral N. S., Florida | Opunta stricta fruit | PK?CanaOsA |
91-861.2 | P. k. var. ? | Big Bend N. Park, Texas | Opuntia engelmanii | PK?BigBOeA |
91-620.2 | P. k. var. eremophila | Baja California, Mexico | Myrtillocactus cochal | PKeStCaMcD |
91-636.1 | P. k. var. eremophila | Tuscon, Arizona | Opunta phaeacantha | PKeTucsOpC |
83-466.1AC | P. k. var. eremophila | Tucson, Arizona | Opuntia phaeacantha | PKeTucsOpB |
91-528.2 | P. k. var. eremophila | Baja California, Mexico | Stenocereus gummosus | PKePuntSgA |
91-612.2 | P. k. var. eremophila | Baja California, Mexico | Stenocereus gummosus | PKeStCaSgA |
83-466.1 | P. k. var. eremophila | Tucson, Arizona | Opuntia phaeacantha | PKeTucsOpA |
86-541.5A | P. k. var. eremophila | Baja California, Mexico | Opuntia sp. | PKeVizcOxA |
91-536.2 | P. k. var. eremophila | Baja California, Mexico | Stenocereus gummosus | PKePuntSgB |
91-539.2 | P. k. var. eremophila | Baja California, Mexico | Stenocereus gummosus | PKePuntSgC |
91-549.3 | P. k. var. eremophila | Baja California, Mexico | Pachycereanus pringlei | PKePuntCgA |
91-601.2 | P. k. var. eremophila | Baja California, Mexico | Stenocereus gummosus | PKeStInSgA |
91-604.5 | P. k. var. eremophila | Baja California, Mexico | Stenocereus gummosus | PKeStInSgB |
91-608.2 | P. k. var. eremophila | Baja California, Mexico | Stenocereus gummosus | PKeStInSgC |
91-609.3 | P. k. var. eremophila | Baja California, Mexico | Lophocereus schottii | PKeStInLsA |
91-614.2 | P. k. var. eremophila | Baja California, Mexico | Stenocereus gummosus | PKeStCaSgB |
91-616.2 | P. k. var. eremophila | Baja California, Mexico | Stenocereus gummosus | PKeStCaSgC |
91-642.1 | P. k. var. eremophila | Tuscon, Arizona | Opunta phaeacantha | PKeTucsOpD |
91-862.2 | P. k. var. eremophila | Big Bend N. Park, Texas | Opuntia engelmanii | PKeBigBOeB |
91-864.2 | P. k. var. eremophila | Big Bend N. Park, Texas | Opuntia engelmanii | PKeBigBOeC |
91-R105 | P. k. var. eremophila | Tucuman, Argentina | Pachycereinae cactus | PKeArgePaA |
94-162.2 | P. k. var. eremophila | Davis Mountains, Texas | Opuntia engelmanii | PKeDaviOeA |
94-165.4 | P. k. var. eremophila | Davis Mountains, Texas | Opuntia engelmanii | PKeDaviOeB |
94-169.2 | P. k. var. eremophila | Davis Mountains, Texas | Opuntia engelmanii | PKeDaviOeC |
90-255.3 | P. k. var. cephalocereana | Clarence House, Antigua | Tomato | PKcClarLeA |
83-856.1 | Pichia barkeri | Navassa I., the Bahamas | Opuntia stricta | PBaNavaOsA |
90-208.1 | P. k. var. kluyveri | Clarence House, Antigua | Cephalocereanus royenii | PKkClarCrA |
82-555B-13 | P. k. var. cephalocereana | Monserrat | Cephalocereanus royenii | PKcMontCrA |
82-555B-17 | P. k. var. cephalocereana | Monserrat | Cephalocereanus royenii | PKcMontCrB |
82.556D-30 | P. k. var. cephalocereana | Monserrat | Cephalocereanus royenii | PKcMontCrC |
90-210.1 | P. k. var. ? | Clarence House, Antigua | Cephalocereanus royenii | PK?ClarCrB |
90-300.5 | P. k. var. ? | Cartagena, Colombia | Tomato | PK?CartLeA |
91-127.2 | P. k. var. ? | Lake Placid, Florida | Opunta humifisa | PK?ArchOhA |
83-866.4 | Pichia barkeri | Navassa I., the Bahamas | Opuntia stricta | PBaNavaOsB |
88-335.2 | P. k. var. kluyveri | Miami, Florida | Tomato | PKkMiamLeB |
88-362.2 | P. k. var. kluyveri | Fayetteville, Arkansas | Tomato | PKkArkaLeA |
91-142.3 | P. k. var. kluyveri | Lake Placid, Florida | Opunta humifisa fruit | PKkArchOhB |
91-203.1 | P. k. var. kluyveri | Flamingo, Florida | Opunta stricta | PKkEverOsA |
84-823.2 | P. k. var. kluyveri | Trinkey, Australia | Opuntia stricta | PKkTrinOsA |
90-232.1 | P. k. var. kluyveri | Willoughby Bay, Antigua | Cephalocereanus royenii | PKkWillCrB |
90-301.4 | P. k. var. kluyveri | Cartagena, Colombia | Tomato | PKkCartLeB |
91-101.4 | P. k. var. kluyveri | Canaveral N. S., Florida | Opunta stricta | PKkCanaOsB |
91-114.4 | P. k. var. kluyveri | Canaveral N. S., Florida | Opunta stricta | PKkCanaOsA |
88-324.1 | P. k. var. kluyveri | Miami, Florida | Tomato | PKkMiamLeA |
90-226.2 | P. k. var. kluyveri | Willoughby Bay, Antigua | Cephalocereanus royenii | PKkWillCrA |
90-303.2 | P. k. var. kluyveri | Cartagena, Colombia | Tomato | PKkCartLeC |
Table 2. | Strain variation in physiological ability. 3 = strong growth/activity, 2 = latent growth/activity, | ||||||||||||||||||
1 = weak growth/activity, 0 = no growth/activity | |||||||||||||||||||
Code | Species/ | Physiological Test* | |||||||||||||||||
Variety | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | 16 | 17 | 18 | |
PK?ClarCrC | P. k. ? | 0 | 0 | 3 | 3 | 3 | 3 | 3 | 3 | 3 | 3 | 0 | 0 | 3 | 0 | 3 | 0 | 3 | 0 |
PK?CanaOsA | P. k. ? | 0 | 0 | 3 | 3 | 0 | 3 | 3 | 3 | 3 | 3 | 3 | 0 | 0 | 0 | 3 | 0 | 3 | 0 |
PK?BigBOeA | P. k. ? | 0 | 0 | 3 | 2 | 3 | 3 | 3 | 3 | 3 | 0 | 3 | 0 | 3 | 0 | 3 | 3 | 3 | 0 |
PKeStCaMcD | P. k. e. | 0 | 1 | 0 | 0 | 0 | 3 | 3 | 3 | 1 | 0 | 3 | 0 | 3 | 0 | 3 | 3 | 3 | 0 |
PKeTucsOpC | P. k. e. | 0 | 1 | 3 | 0 | 3 | 3 | 3 | 3 | 2 | 0 | 3 | 0 | 3 | 0 | 3 | 3 | 3 | 0 |
PKeTucsOpB | P. k. e. | 0 | 2 | 3 | 2 | 3 | 2 | 3 | 3 | 0 | 0 | 0 | 0 | 3 | 0 | 3 | 3 | 2 | 0 |
PKePuntSgA | P. k. e. | 0 | 2 | 3 | 2 | 3 | 3 | 3 | 3 | 3 | 3 | 3 | 0 | 3 | 0 | 3 | 1 | 3 | 0 |
PKeStCaSgA | P. k. e. | 0 | 2 | 3 | 2 | 0 | 3 | 3 | 3 | 1 | 0 | 3 | 0 | 3 | 0 | 3 | 3 | 3 | 0 |
PKeTucsOpA | P. k. e. | 0 | 3 | 3 | 0 | 3 | 3 | 3 | 3 | 3 | 0 | 0 | 0 | 3 | 0 | 3 | 3 | 2 | 1 |
PKeVizcOxA | P. k. e. | 0 | 3 | 3 | 0 | 0 | 2 | 3 | 3 | 3 | 0 | 0 | 0 | 3 | 0 | 3 | 3 | 2 | 0 |
PKePuntSgB | P. k. e. | 0 | 3 | 3 | 0 | 3 | 3 | 3 | 1 | 3 | 0 | 3 | 0 | 3 | 0 | 3 | 1 | 0 | 0 |
PKePuntSgC | P. k. e. | 0 | 3 | 3 | 0 | 3 | 3 | 3 | 0 | 3 | 0 | 3 | 0 | 3 | 0 | 3 | 3 | 0 | 0 |
PKePuntCgA | P. k. e. | 0 | 3 | 3 | 2 | 3 | 3 | 3 | 0 | 3 | 0 | 3 | 0 | 3 | 0 | 3 | 3 | 0 | 0 |
PKeStInSgA | P. k. e. | 0 | 3 | 3 | 2 | 3 | 3 | 3 | 0 | 1 | 0 | 3 | 0 | 3 | 2 | 3 | 3 | 1 | 0 |
PKeStInSgB | P. k. e. | 0 | 3 | 3 | 0 | 3 | 3 | 3 | 0 | 2 | 0 | 3 | 0 | 3 | 0 | 3 | 0 | 0 | 0 |
PKeStInSgC | P. k. e. | 0 | 3 | 3 | 2 | 3 | 3 | 3 | 0 | 3 | 1 | 3 | 0 | 3 | 0 | 3 | 3 | 3 | 0 |
PKeStInLsA | P. k. e. | 0 | 3 | 3 | 2 | 3 | 3 | 3 | 1 | 3 | 0 | 3 | 0 | 3 | 2 | 3 | 3 | 0 | 0 |
PKeStCaSgB | P. k. e. | 0 | 3 | 3 | 2 | 3 | 3 | 3 | 3 | 2 | 0 | 3 | 0 | 3 | 0 | 3 | 3 | 3 | 0 |
PKeStCaSgC | P. k. e. | 0 | 3 | 3 | 2 | 3 | 3 | 3 | 3 | 3 | 0 | 3 | 0 | 3 | 0 | 3 | 3 | 1 | 0 |
PKeTucsOpD | P. k. e. | 0 | 3 | 3 | 0 | 3 | 3 | 3 | 3 | 3 | 0 | 3 | 2 | 3 | 0 | 3 | 3 | 3 | 0 |
PKeBigBOeB | P. k. e. | 0 | 3 | 3 | 3 | 3 | 3 | 3 | 3 | 3 | 0 | 3 | 0 | 3 | 0 | 3 | 3 | 3 | 0 |
PKeBigBOeC | P. k. e. | 0 | 3 | 3 | 1 | 3 | 3 | 3 | 3 | 3 | 0 | 3 | 0 | 3 | 0 | 3 | 3 | 3 | 0 |
PKeArgePaA | P. k. e. | 0 | 3 | 3 | 3 | 0 | 3 | 3 | 1 | 3 | 0 | 3 | 0 | 0 | 0 | 0 | 0 | 2 | 0 |
PKeDaviOeA | P. k. e. | 0 | 3 | 3 | 0 | 3 | 3 | 3 | 3 | 3 | 0 | 3 | 2 | 3 | 0 | 3 | 3 | 3 | 0 |
PKeDaviOeB | P. k. e. | 0 | 3 | 3 | 0 | 3 | 3 | 3 | 3 | 3 | 0 | 3 | 2 | 3 | 0 | 3 | 3 | 3 | 0 |
Table 2 continued | |||||||||||||||||||
Code | Species/ | Physiological Test* | |||||||||||||||||
Variety | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | 16 | 17 | 18 | |
PKeDaviOeC | P. k. e. | 0 | 3 | 3 | 1 | 3 | 3 | 3 | 3 | 3 | 0 | 3 | 0 | 3 | 0 | 3 | 3 | 3 | 0 |
PKcClarLeA | P. k. c. | 2 | 0 | 3 | 1 | 3 | 3 | 3 | 0 | 3 | 0 | 3 | 0 | 3 | 0 | 3 | 0 | 0 | 0 |
PBaNavaOsA | P. b. | 2 | 1 | 3 | 3 | 3 | 3 | 3 | 3 | 3 | 0 | 3 | 0 | 3 | 0 | 3 | 3 | 2 | 3 |
PKkClarCrA | P. k. k. | 2 | 2 | 3 | 0 | 3 | 3 | 3 | 3 | 2 | 0 | 0 | 0 | 3 | 0 | 3 | 3 | 2 | 0 |
PKcMontCrA | P. k. c. | 3 | 0 | 3 | 2 | 3 | 3 | 3 | 3 | 2 | 0 | 0 | 0 | 3 | 0 | 3 | 3 | 2 | 0 |
PKcMontCrB | P. k. c. | 3 | 0 | 3 | 0 | 3 | 3 | 3 | 3 | 2 | 0 | 0 | 0 | 3 | 0 | 3 | 3 | 3 | 0 |
PKcMontCrC | P. k. c. | 3 | 0 | 3 | 2 | 3 | 3 | 3 | 3 | 1 | 0 | 0 | 0 | 3 | 0 | 3 | 3 | 0 | 0 |
PK?ClarCrB | P. k. ? | 3 | 0 | 3 | 2 | 3 | 3 | 3 | 3 | 3 | 0 | 0 | 0 | 3 | 0 | 3 | 3 | 1 | 0 |
PK?CartLeA | P. k. ? | 3 | 0 | 3 | 3 | 0 | 3 | 3 | 3 | 3 | 3 | 0 | 0 | 3 | 0 | 3 | 3 | 3 | 3 |
PK?ArchOhA | P. k. ? | 3 | 0 | 3 | 1 | 3 | 3 | 3 | 3 | 2 | 0 | 3 | 0 | 3 | 0 | 3 | 3 | 3 | 0 |
PBaNavaOsB | P. b. | 3 | 1 | 3 | 3 | 3 | 3 | 3 | 3 | 3 | 0 | 3 | 0 | 3 | 0 | 3 | 3 | 3 | 3 |
PKkMiamLeB | P. k. k. | 3 | 1 | 3 | 3 | 3 | 2 | 3 | 0 | 0 | 0 | 0 | 0 | 3 | 0 | 3 | 2 | 2 | 0 |
PKkArkaLeA | P. k. k. | 3 | 1 | 3 | 3 | 0 | 3 | 3 | 3 | 2 | 0 | 0 | 0 | 3 | 0 | 3 | 3 | 3 | 0 |
PKkArchOhB | P. k. k. | 3 | 1 | 3 | 0 | 0 | 2 | 2 | 0 | 3 | 0 | 3 | 0 | 3 | 3 | 3 | 3 | 2 | 3 |
PKkEverOsA | P. k. k. | 3 | 1 | 3 | 2 | 3 | 3 | 3 | 3 | 3 | 0 | 3 | 3 | 3 | 0 | 3 | 1 | 3 | 0 |
PKkTrinOsA | P. k. k. | 3 | 2 | 3 | 3 | 3 | 3 | 3 | 3 | 2 | 0 | 0 | 0 | 3 | 0 | 3 | 2 | 2 | 0 |
PKkWillCrB | P. k. k. | 3 | 2 | 3 | 2 | 3 | 3 | 3 | 3 | 2 | 0 | 0 | 0 | 3 | 0 | 3 | 3 | 3 | 0 |
PKkCartLeB | P. k. k. | 3 | 2 | 3 | 3 | 3 | 2 | 3 | 2 | 2 | 0 | 0 | 0 | 3 | 0 | 3 | 3 | 3 | 0 |
PKkCanaOsB | P. k. k. | 3 | 2 | 3 | 2 | 3 | 3 | 3 | 2 | 2 | 0 | 3 | 0 | 3 | 0 | 3 | 2 | 0 | 0 |
PKkCanaOsA | P. k. k. | 3 | 2 | 3 | 2 | 3 | 3 | 3 | 1 | 3 | 0 | 3 | 3 | 3 | 0 | 3 | 3 | 3 | 0 |
PKkMiamLeA | P. k. k. | 3 | 3 | 3 | 3 | 0 | 2 | 3 | 3 | 3 | 0 | 0 | 0 | 3 | 0 | 3 | 3 | 2 | 0 |
PKkWillCrA | P. k. k. | 3 | 3 | 3 | 0 | 3 | 3 | 3 | 3 | 2 | 0 | 0 | 0 | 3 | 0 | 3 | 3 | 1 | 0 |
PKkCartLeC | P. k. k. | 3 | 3 | 3 | 3 | 3 | 3 | 3 | 2 | 3 | 0 | 0 | 0 | 3 | 0 | 3 | 3 | 3 | 2 |
*1 = Glucose Fermentation, 2 = Y-55 Killer, 3 = Ethanol, 4 = Glycerol, 5 = Glucosamine, 6 = Lactate, | |||||||||||||||||||
7 = Succinate, 8 = Citrate, 9 = growth at 37°C, 10 = growth at 42°C, 11 = 5% NaCl, | |||||||||||||||||||
12 = Extracellular Lipase, 13 = Ethylamine, 14 = Digitonin, 15 = Ethyl Acetate, 16 = Lysine, | |||||||||||||||||||
17 = Malate, 18 = N-acetyl-glucosamine |
Table 3. | Similarity (average correlation) of physiological profiles between unclassified and | ||||
classified strains | |||||
Unclassified | |||||
Strain | Collecton Locale | Host | Varieties | ||
eremophila | cephalocereana | klyyveri | |||
PK?ClarCrC | Clarence House, Antigua | Cephalocereus royenii | 0.39 | 0.50 | 0.37 |
PK?CanaOsA | Canaveral N. S., Florida | Opunta stricta fruit | 0.30 | 0.20 | 0.15 |
PK?BigBOeA | Big Bend N. Park, Texas | Opuntia engelmanii | 0.70 | 0.64 | 0.54 |
PK?ClarCrB | Clarence House, Antigua | Cephalocereus royenii | 0.47 | 0.85 | 0.70 |
PK?CartLeA | Cartagena, Colombia | Tomato | 0.08 | 0.42 | 0.37 |
PK?ArchOhA | Lake Placid, Florida | Opunta humifisa | 0.56 | 0.77 | 0.64 |
Within variety average | 0.69 | 0.71 | 0.61 |
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Last Updated May 19, 1999